PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033568.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 168aa    MW: 18987.5 Da    PI: 8.8418
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033568.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-104890754
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 ++ r+RR+ri ++f  L++l+P        +++ +++Le+A++Y+k L
  Oeu033568.1 48 IAARQRRRRISDRFKILQSLVPGG-----SRMDTVSMLEEAIQYVKFL 90
                 567*******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MDYSYSLNPN SCESTSVQNN SNVNSKMKSG GLKKRGKVMK LSTDPQSIAA RQRRRRISDR  60
FKILQSLVPG GSRMDTVSML EEAIQYVKFL KTQILLHQTA MINFANDDPT LYLQPNSLPF  120
HYQSDHNLCP ENNYIGHQIA QYPKVGSSNS CLLGDQEIMS FDAYCYY*