PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033589.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 225aa    MW: 26840.5 Da    PI: 9.6383
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033589.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.11.1e-182622386
     trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                 ++k++k lWe +s +m+e+g++rs+ qCk+kw+nl +r+k ++++e+++    ++++p++++l+
  Oeu033589.1  2 ETKRNKLLWEVISTRMKEKGYNRSADQCKCKWKNLVTRFKGCETMESEG---MRQQFPFYNELQ 62
                 56889******************************************97...56679*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
METKRNKLLW EVISTRMKEK GYNRSADQCK CKWKNLVTRF KGCETMESEG MRQQFPFYNE  60
LQAIFGARMQ RMLWIEAEGG GASSSKKKAA ATAQISSDEE DDNDDSDVDQ KGSSKKKRKT  120
RSNTNTGNSS NLITSIREIM EEFMKQQMQM EMQWLKAYEA REQERRIKEM EWRKTMEDLE  180
NERMMMDRKW REREEQRRIR EEARAEKRDT LITALLNKLR REDM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110119QKGSSKKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.14e-37Trihelix family protein