PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033647.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 226aa    MW: 25070.6 Da    PI: 8.5029
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033647.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.82e-20115149135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  Oeu033647.1 115 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 149
                  ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MMQRCNNSCG QCSCGLYHTS NNSFSMIFSS PNSKPFDHDH GDMYSASSSV DCTLSLGTPS  60
TRLTNENEKK RYSCMSNFGW NILQSKPPST AGKHRGGSNS ITSSSGGDPL LARRCANCDT  120
TSTPLWRNGP RGPKSLCNAC GIRFKKEERR ATAVNNGGSA AANNSSWVHH HSQHEKMPCF  180
SSSNYANEFR FIEENDHHES ENGIPFRTWR FNVTDRPNFV HDFTR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.12e-55GATA family protein