PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033723.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 311aa    MW: 34951.1 Da    PI: 6.9192
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033723.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.11.8e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
      Oeu033723.1 14 KGPWTPEEDIILVSYIQEHGPGNWRLVPTNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding45.32.1e-1467112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+  ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
      Oeu033723.1  67 RGNFTPHEEGMIIHLQALLGNK-WAAIASYFP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MGRPPCCNKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRLV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEGMIIH LQALLGNKWA AIASYFPQRT DNDIKNYWNT HLKKKIKKFQ  120
TGLDAQLASD SATCRFLSSY NEKGLDNSSR HDSSSNVRLT ENSNSIYASS AENISRLLEG  180
WMKSSPKISP QNNPSAECCE GTTTTAESRH YYRQRVDQQE STKVIPSDEF ESILSFDQNV  240
NGLACDKSSC DSSKKGSEIS GNEEEKVNFV VHEQKPKMEN NPPLSFLENW LLDESANHEG  300
EEVMGLSPIF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.12e-96MYB family protein