PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033741.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 294aa    MW: 30621.5 Da    PI: 9.5544
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033741.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.51.7e-063659225
                 -S---SGGGGTS--TTTTT-SS-S CS
      zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                 k ++C  f+ t  C++G++C+F H
  Oeu033741.2 36 KSKPCTKFFSTAGCPFGESCHFLH 59
                 7789******************** PP
2zf-CCCH27.65e-0997122227
                  -S---SGGGGTS--TTTTT-SS-SSS CS
      zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                  kt++C+ f     Ck+Gd+C+FaHg+
  Oeu033741.2  97 KTKICNKFNTAEGCKFGDKCHFAHGE 122
                  89**********************96 PP
3zf-CCCH38.32.3e-12260285127
                  --S---SGGGGTS--TTTTT-SS-SSS CS
      zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                  ykt++C +f++ G C +GdrC+FaHg+
  Oeu033741.2 260 YKTKICENFSK-GSCTFGDRCHFAHGE 285
                  9**********.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDTRKRGRGE ATFNANGGFK KSKPEMDSLS SGIGSKSKPC TKFFSTAGCP FGESCHFLHY  60
VPGGYNAVAQ MMNLAPAPAR TTGPQTMSNG SASTAVKTKI CNKFNTAEGC KFGDKCHFAH  120
GEWELGKPIA PSQEDLRAVG PTPSRFGGRT DPPVPSGSFG ASATAKISLD ASLAGAIIGK  180
GGVNSKQICR QTGAKLAIRD HETDTNLRNI ELEGTFEQIK EASAMVRDLI SSIGFAGGPA  240
KPAGGPAKQT GGPAAPRSNY KTKICENFSK GSCTFGDRCH FAHGEAELRQ PGA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.14e-93C3H family protein