PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033744.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 392aa MW: 41670.2 Da PI: 8.6463

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033744.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	70.1	4.1e-22	68	114	1	47
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 +CqvegC++dls+ k y++rhkvC +hsk+ +v+v+gleqrfCqqCs Oeu033744.1 68 RCQVEGCKVDLSDSKAYYSRHKVCGMHSKSRKVIVAGLEQRFCQQCS 114 6*********************************************9 PP
2	SBP	51.6	2.5e-16	138	167	47	76
SSEEETTT--SS--S-STTTT-------S- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkk 76 srfh+lsefD++krsCrrrLa+hnerrrk+ Oeu033744.1 138 SRFHQLSEFDQGKRSCRRRLAGHNERRRKP 167 9***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MEEGSGSGAQ DSLYGLNFGR KIYFEDVGSG VQAKIGDGPS PVVSSGLPPP VPAKKGKGGG 60 AQGSQPPRCQ VEGCKVDLSD SKAYYSRHKV CGMHSKSRKV IVAGLEQRFC QQCSSGFGSR 120 VPGYFPVQFP QLGQAMRSRF HQLSEFDQGK RSCRRRLAGH NERRRKPPPG SLPSTRHGNF 180 SSSIFEAHGR NGGFVMDFSS YPSAAGRNSW PNMSSSEGGL GNQVPVAEKF IPSPWHRNSE 240 NPPPPNLLQG STTSASYLGP RLSSGSFSGV SDSGSALSLL SSQTWGSRNI PSCPGLNTLY 300 GPNGTSMVQP PVAHDASVGD FMSLPWGFKD NQASIGSHEM PPDLGLGQIS HPANSQYSNE 360 LELAQQGGGQ YHELELSTGY ASPVEDLHWS P*

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MEEGSGSGAQ DSLYGLNFGR KIYFEDVGSG VQAKIGDGPS PVVSSGLPPP VPAKKGKGGG  60
AQGSQPPRCQ VEGCKVDLSD SKAYYSRHKV CGMHSKSRKV IVAGLEQRFC QQCSSGFGSR  120
VPGYFPVQFP QLGQAMRSRF HQLSEFDQGK RSCRRRLAGH NERRRKPPPG SLPSTRHGNF  180
SSSIFEAHGR NGGFVMDFSS YPSAAGRNSW PNMSSSEGGL GNQVPVAEKF IPSPWHRNSE  240
NPPPPNLLQG STTSASYLGP RLSSGSFSGV SDSGSALSLL SSQTWGSRNI PSCPGLNTLY  300
GPNGTSMVQP PVAHDASVGD FMSLPWGFKD NQASIGSHEM PPDLGLGQIS HPANSQYSNE  360
LELAQQGGGQ YHELELSTGY ASPVEDLHWS P*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57920.1	1e-43	SBP family protein