PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033827.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 495aa MW: 56657.2 Da PI: 6.4519

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033827.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.9	1.7e-10	105	140	1	36
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+l+L+e+r++++ +++++++k+plW+evs+ Oeu033827.1 105 RWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSR 140 8*********************************97 PP
2	trihelix	50.1	7e-16	367	445	2	83
trihelix 2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 W+++e+ L ++r meer+++ + ++ Wee++ km+ g rs +Ckekw+++n++ ++++ ++++ + c+y++ Oeu033827.1 367 WPDREITRLFQLRAGMEERFQQrRVSEDVIWEEIATKMACFGHDRSGLTCKEKWDSVNNYLLECNNKRREN----PKGCSYYQ 445 *******************72569999**********************************999984....44588876 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MEDQYEMGDL RQCINGRALF PPISQPPDLL SGHSGFTPAQ HYEMLMVPRG LHQEFLSDST 60 PSASLNLSKS ASTGGASSIG AGVGGFDMEA AGLNCGSGGD MGTGRWPRQE TLTLLEVRSR 120 LDPKFKEANQ KGPLWDEVSR EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGETN 180 NGVVALETHV VGSSFGYKTP NAVPNHETYP APRISDYSLS LSNSSDFDTT SSDDSDLHEG 240 IDDNLTNKRK KSRGKRCWKA KIRDFIDAQM RKMMDKQEAW MEKMMITIEH KEQERILRER 300 EWRKQDAERI EREQKFWANE RAWIEGRDAS LMEALQKLNG KELMVAAEIQ SLSANPNNDT 360 VKGDHIWPDR EITRLFQLRA GMEERFQQRR VSEDVIWEEI ATKMACFGHD RSGLTCKEKW 420 DSVNNYLLEC NNKRRENPKG CSYYQNNNES ICNERDADHT SRSNDNGMND FCFRYFMGDA 480 GNTWENYALK LNKG*

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MEDQYEMGDL RQCINGRALF PPISQPPDLL SGHSGFTPAQ HYEMLMVPRG LHQEFLSDST  60
PSASLNLSKS ASTGGASSIG AGVGGFDMEA AGLNCGSGGD MGTGRWPRQE TLTLLEVRSR  120
LDPKFKEANQ KGPLWDEVSR EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGETN  180
NGVVALETHV VGSSFGYKTP NAVPNHETYP APRISDYSLS LSNSSDFDTT SSDDSDLHEG  240
IDDNLTNKRK KSRGKRCWKA KIRDFIDAQM RKMMDKQEAW MEKMMITIEH KEQERILRER  300
EWRKQDAERI EREQKFWANE RAWIEGRDAS LMEALQKLNG KELMVAAEIQ SLSANPNNDT  360
VKGDHIWPDR EITRLFQLRA GMEERFQQRR VSEDVIWEEI ATKMACFGHD RSGLTCKEKW  420
DSVNNYLLEC NNKRRENPKG CSYYQNNNES ICNERDADHT SRSNDNGMND FCFRYFMGDA  480
GNTWENYALK LNKG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	2e-94	Trihelix family protein