PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034065.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 224aa    MW: 25132 Da    PI: 9.9065
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034065.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-12104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++ G+g+W+ I+r + ++Rt+ q+ s+ qky
      Oeu034065.1 104 PWTEEEHRAFLIGLEKQGKGDWRGISRNFVTTRTPTQVASHAQKY 148
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGRKCSICGH IGHNSRTCII SRGSVNVRLF GVQLEVSSPS VPIKKCFSLD CLPSSSLPAA  60
ASSSSLSCSL SSQVSINENS DKTLIGYLSD GHLPQVQERK KGIPWTEEEH RAFLIGLEKQ  120
GKGDWRGISR NFVTTRTPTQ VASHAQKYFL RQASLYKKKR RSSLFDMVYI HFFNFTCATQ  180
TCLMHVWYSL SCQKSRVYLA YVWPPFCKNA FFSKPILNHT FSC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157161KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-48MYB_related family protein