PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034228.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 280aa    MW: 32586.3 Da    PI: 7.3611
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034228.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.92.4e-181966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd+llv++++ +G g+W+  a+  g++Rt+k+c++rw++yl
      Oeu034228.1 19 RGPWTVEEDDLLVRYITSHGEGHWNYLAKFAGLKRTGKSCRLRWLNYL 66
                     89********************************************97 PP
2Myb_DNA-binding47.93.2e-1573115246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
      Oeu034228.1  73 GNLTPQEQLLILELHCKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 115
                      678******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MSRLGINTNT HEDAYELRRG PWTVEEDDLL VRYITSHGEG HWNYLAKFAG LKRTGKSCRL  60
RWLNYLKPDV KHGNLTPQEQ LLILELHCKW GNRWSKIAQH LPGRTDNEIK NYWRTRVQKH  120
ARQLKIDGNS KKFHEAIRRF WVPRLLEKME QNSSATSSPS SSISTLETQT PINTTPCPKY  180
RFQVNNSDQH KEYSHSNSLE SGIISQLTAE NSEMNTAYNN SFQDDGYHVD ISSNNILEME  240
SQQEILRSQC QQMEEIDWFG EGMAGTFWNA GEFWDFRKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.18e-81MYB family protein