PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034340.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 290aa    MW: 32348.5 Da    PI: 6.9463
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034340.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23.1e-08160201955
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   r+RR+ri ++   L++llP++     k+++ a++Le++ +YIk Lq
  Oeu034340.1 160 ARQRRQRISDKTRCLQKLLPWD-----KRMDMATMLEETYKYIKFLQ 201
                  59********************.....89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MAVDEAFFNG VYAGLTFHSL LKQDQTPPPP PPLPPFLEPS LNYDPNGNGF PATEIQNLKI  60
PKTEQQFFNV NSSVSCEVPQ YNFFSNTTPS VAESDVVFPQ LPGLLSLELP QYKHFHLAAS  120
SSSNSVEPAG SATHSEKSYN QHRFGPYRSP GPVSPSSTLA RQRRQRISDK TRCLQKLLPW  180
DKRMDMATML EETYKYIKFL QAQVSVLQSM PSNTTAAPPR SFGNDENDGV YGGVLGRLNR  240
QQLLEVVVNS PVAQTMLYSK ECCIYSVEQL NMLQNMAERN AFFHHMHGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.19e-26bHLH family protein