PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034345.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 905aa MW: 101491 Da PI: 10.1588

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034345.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	773	818	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+ +Er+R ++i +++ L++l+P + +k Ka iL k ++Y+ s Oeu034345.1 773 RHSLAERKR-ENIHERMKVLQDLVPGC----DKITGKAIILDKLTNYVLSF 818 699999996.9*************9....899***********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 905 aa Download sequence
MESTSGKELV TVASFGRGFS YRGDSEVEQI AMTKKAVYFN VEWGSSRVPS NMTLKRLGEI 60 RERYCVPHYV EMLVPEAHER ACYPRPGCVA VSKYLFKAGS AKWVESVGRF VVPMEGSVAW 120 GEHASPHSST RFELSKEEFE VIEDIYKRPL KLRHFDHLID RSRYFLDFKL MASKDKFKRK 180 EYPAPDMASI IRDTSTVKAR PPEIGVQWCQ RGKEKVLKEP KKRKLVHVTS SSGKFGTSVS 240 HKGKESGQPK LLSAVSKAVK IEMVHRTEAE KAMEEATRRE AEAAEEETAK QRPARVQGKS 300 PNFLAGREKG LAPALVEALP PEIRSATESF YKFWTDRWEV LTDFQTRTLS SEKKVTSLAK 360 ELKGARVEAD EARAQKLEDT AKLESSLAQI KALKKEVTVE ALEKANMELA GAQDAYKFIE 420 GHLNARSIIV PWRGPVRLGR IVSVPRGFLS GAVSILSAIC YVVSIGLVSS HLLGVSDGVD 480 VFVCQCRDNV KSGGGQCLPR TLITSLVHLV VHQVGGLTSS TLPLRRWEAS IRSVPMLNQF 540 FIDDFPSHHL EWEVIMVKGG LGGSAGTIVG GNVNFHLPFK WAYTSAVVRR GSPMALNFVF 600 LVVLPLKSVW RNREASLAQH LGHKFPHSQI FVKSWGFLLF FFKNKSFFKG DAQMFLFNKF 660 SLQEDLLGEV SIEEVVLCFE GLSPRLRNFG NTGPRPPSKG LGIWVSEFLM RQGSMSFGYA 720 NHLGLSGTWF GMSWWWAPAS SMGGMKSLKM KMRKNRDKNY VQVRAKRGEA TTRHSLAERK 780 RENIHERMKV LQDLVPGCDK ITGKAIILDK LTNYVLSFQH QVEFLSMKLA AVDNRQKYGL 840 DQFLLGDIHQ SQGGITSTVD NLEMGSFYSL QGFNKLRGAS FLVSPTYNLV LRRFFEVDLT 900 SITT*

Sequence ? help Back to Top

Protein Sequence Length: 905 aa Download sequence

MESTSGKELV TVASFGRGFS YRGDSEVEQI AMTKKAVYFN VEWGSSRVPS NMTLKRLGEI  60
RERYCVPHYV EMLVPEAHER ACYPRPGCVA VSKYLFKAGS AKWVESVGRF VVPMEGSVAW  120
GEHASPHSST RFELSKEEFE VIEDIYKRPL KLRHFDHLID RSRYFLDFKL MASKDKFKRK  180
EYPAPDMASI IRDTSTVKAR PPEIGVQWCQ RGKEKVLKEP KKRKLVHVTS SSGKFGTSVS  240
HKGKESGQPK LLSAVSKAVK IEMVHRTEAE KAMEEATRRE AEAAEEETAK QRPARVQGKS  300
PNFLAGREKG LAPALVEALP PEIRSATESF YKFWTDRWEV LTDFQTRTLS SEKKVTSLAK  360
ELKGARVEAD EARAQKLEDT AKLESSLAQI KALKKEVTVE ALEKANMELA GAQDAYKFIE  420
GHLNARSIIV PWRGPVRLGR IVSVPRGFLS GAVSILSAIC YVVSIGLVSS HLLGVSDGVD  480
VFVCQCRDNV KSGGGQCLPR TLITSLVHLV VHQVGGLTSS TLPLRRWEAS IRSVPMLNQF  540
FIDDFPSHHL EWEVIMVKGG LGGSAGTIVG GNVNFHLPFK WAYTSAVVRR GSPMALNFVF  600
LVVLPLKSVW RNREASLAQH LGHKFPHSQI FVKSWGFLLF FFKNKSFFKG DAQMFLFNKF  660
SLQEDLLGEV SIEEVVLCFE GLSPRLRNFG NTGPRPPSKG LGIWVSEFLM RQGSMSFGYA  720
NHLGLSGTWF GMSWWWAPAS SMGGMKSLKM KMRKNRDKNY VQVRAKRGEA TTRHSLAERK  780
RENIHERMKV LQDLVPGCDK ITGKAIILDK LTNYVLSFQH QVEFLSMKLA AVDNRQKYGL  840
DQFLLGDIHQ SQGGITSTVD NLEMGSFYSL QGFNKLRGAS FLVSPTYNLV LRRFFEVDLT  900
SITT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	224	KEPKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	8e-33	bHLH family protein