PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034385.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 287aa MW: 33028.4 Da PI: 9.2537

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034385.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.2	9.2e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l++++kq+G g+W++ ++ g+ R++k+c++rw +yl Oeu034385.1 14 KGAWTKEEDERLINYIKQHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	52.4	1.2e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE+e +++ + +lG++ W++Ia++++ gRt++++k++w+++ Oeu034385.1 67 RGNFTEEEEEFIINFHGLLGNK-WSLIAARLP-GRTDNEIKNFWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MGRSPCCEKE HTNKGAWTKE EDERLINYIK QHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEEEFIIN FHGLLGNKWS LIAARLPGRT DNEIKNFWNT HIKRKLLNRG 120 IDPQTHRPLS STIKTPNLNK KISISNQENN LSQFSEIAQT FSLHSINVSE DYLMKNTINS 180 KVRSDSAEES YSRSVLSNEL QPQINLELSI SLHKSYEKSA IKLNDQKQEK QQFEDQPFGK 240 LMSPTVTRSG CFCYNLGFQN GNACHCKSMK NVNTDDMQRY SRHLSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-86	MYB family protein