PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034420.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 240aa MW: 25681.6 Da PI: 8.5374

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034420.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.6	1.9e-37	37	148	3	113
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.......... 88 +kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+ a+p+i+++tg+++++as++ +++++ss+ +s+ + Oeu034420.1 37 VKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRHAEPSIIAATGSGTTPASFAtvCTSTRNSSVPHSQLSptnfilgkrl 134 79*************************************************************99999888555555555555544443333333333 PP TCP 89 kaaksaakskksqksaasalnlake 113 + ++++ ++++l+ke Oeu034420.1 135 R-----------PDDDDHHHHLSKE 148 0...........3333334444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MSAADCNGSG LDIIDPSQKQ TLSSLGGATT TNGGLQVKKP PAKDRHSKVD GRGRRIRMPI 60 ICAARVFQLT RELGHKSDGQ TIEWLLRHAE PSIIAATGSG TTPASFATVC TSTRNSSVPH 120 SQLSPTNFIL GKRLRPDDDD HHHHLSKEDM GSSVAPGGFW ALPTRPDFGQ VWSIAQQQPS 180 SSFRFLQQQQ PPGMGEASAA RIGNYLPIAQ VQGHHLNLLA SLSGQAHQSS EQPREDDGN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-71	TCP family protein