PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034495.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 423aa MW: 47144 Da PI: 6.7194

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034495.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.6	1e-39	158	234	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gC++dls+ k+yh+rhkvC+vhsk++vv+v+g+eqrfCqqCsrf l efDe+krsCr+ La+hn+rrrk q Oeu034495.1 158 VCQVYGCNKDLSSSKDYHKRHKVCDVHSKTAVVIVNGIEQRFCQQCSRFQVLAEFDEGKRSCRKSLAGHNKRRRKLQ 234 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MESLCYAFEG RGLLFSDDIE LPGDMKPLSD FDKNMLVPIG EGNGGTEFTE FGLPHMTKNL 60 LLDGPAWCST AETDDNPTST SIFNLFPGEM ELGRFSSSSI RARDKTLPQI NLEVENLAAR 120 REINGTSVSR EKSVSSSPES QLPAKRSLCT NLHSRLPVCQ VYGCNKDLSS SKDYHKRHKV 180 CDVHSKTAVV IVNGIEQRFC QQCSRFQVLA EFDEGKRSCR KSLAGHNKRR RKLQLDTHLG 240 PSLMGADLSR SSFLLSGNLP GGFFPQRFDE PNNNCSKRIK YEGGANQISE LAMPMKFWQS 300 CAKPFQYHSK NCLDSPSSIQ ELSQGSNSGR ALSLLSHNIL SNYAGSPKAF PLIFEEDNRT 360 NCRMDELFQE SNAMTAKNYS SPEVAETVDL FELSFHLERV EQQRHSAQAK QENDMFSCST 420 IT*

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MESLCYAFEG RGLLFSDDIE LPGDMKPLSD FDKNMLVPIG EGNGGTEFTE FGLPHMTKNL  60
LLDGPAWCST AETDDNPTST SIFNLFPGEM ELGRFSSSSI RARDKTLPQI NLEVENLAAR  120
REINGTSVSR EKSVSSSPES QLPAKRSLCT NLHSRLPVCQ VYGCNKDLSS SKDYHKRHKV  180
CDVHSKTAVV IVNGIEQRFC QQCSRFQVLA EFDEGKRSCR KSLAGHNKRR RKLQLDTHLG  240
PSLMGADLSR SSFLLSGNLP GGFFPQRFDE PNNNCSKRIK YEGGANQISE LAMPMKFWQS  300
CAKPFQYHSK NCLDSPSSIQ ELSQGSNSGR ALSLLSHNIL SNYAGSPKAF PLIFEEDNRT  360
NCRMDELFQE SNAMTAKNYS SPEVAETVDL FELSFHLERV EQQRHSAQAK QENDMFSCST  420
IT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	4e-52	SBP family protein