PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034509.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 144aa    MW: 16275 Da    PI: 4.8004
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034509.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB172.83.6e-5435130297
        NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                  +eqdr+lPianvsrimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal++lGf+dy+e+l+ yl+kyre+eg++
  Oeu034509.1  35 KEQDRLLPIANVSRIMKQILPPNAKISKEAKETTQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALGSLGFDDYAESLRRYLHKYREAEGDR 130
                  89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MVDNIESSSE RLKYNIYAAD ASIHDSVEED QGTIKEQDRL LPIANVSRIM KQILPPNAKI  60
SKEAKETTQE CVSEFISFVT GEASDKCHKE KRKTVNGDDI CWALGSLGFD DYAESLRRYL  120
HKYREAEGDR ANQNKSSNNE ERD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.11e-61NF-YB family protein