PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034561.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 228aa    MW: 27267.1 Da    PI: 9.0016
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034561.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix61.52e-192721386
     trihelix 13 arremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                 +r e+++++ ++k++k lWe +s km+e+g+++s++qCk+kw+nl +ryk  +++e +   + ++++p++++l+
  Oeu034561.1  2 IRGELDQNFMETKRNKLLWELISMKMKEKGYNKSSEQCKCKWKNLVTRYKGYATMEAE---DMRQQFPFYNELH 72
                 7999*****************************************************8...466789*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MIRGELDQNF METKRNKLLW ELISMKMKEK GYNKSSEQCK CKWKNLVTRY KGYATMEAED  60
MRQQFPFYNE LHAIFVARMQ RMVSFEAEDG SNSKKKAVQE ISSDEENNSD GAKKKRKIKG  120
NANPSGSSSS TGKLNITNIK EILENFMKQQ IQMENQWIKA YEEREEERRI KEMEWRQTME  180
DLENERIMMD SRWREIEEQR RIREETRATK MDFLITTILN KLTREDL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194116KKKAVQEISSDEENNSDGAKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.18e-50Trihelix family protein