PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu034668.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family BBR-BPC
Protein Properties Length: 260aa    MW: 28733 Da    PI: 9.9845
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu034668.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind306.31.1e-93125929301
    GAGA_bind  29 mssiaerdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslq 112
                  m s+aerd+k+    r+  + + + ++a+++rd          m++  rd+++++        ++k+l++ + +      +pv ++++    + +s+q
  Oeu034668.1   1 MPSVAERDTKPfltgRDTPV-MVAANGAFYPRDcmvteppvthMDY-VRDSWINH--------RDKFLHMFPGNL----YNPVLMETSG---NHHSMQ 81 
                  889**********9888888.99***********************.9******9........678999999433....3444433333...334444 PP

    GAGA_bind 113 qlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPv 210
                  +       +++  +++++ + + p   ++++++e ++kk+++ a++pk++kakk kk  + +k++ +++   +r+k++kk++d+v+ngv++D+s++P+
  Oeu034668.1  82 M------LEQPDSTKDSRVSVEDP---SVNKEDEIPSKKRSAAAASPKTPKAKKSKKGLSLPKETGNSSV--QRAKTSKKNLDIVINGVDMDISGIPI 168
                  4......33344444444444445...4556666777777788999999999999998888877777777..79************************ PP

    GAGA_bind 211 PvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                  PvCsCtG+l+qCY+WG+GGWqSaCCttt+S+yPLP+stkrrgaRiagrKmSqgafkk+LekLa+eGy++ np+DLk +WAkHGtnkfvtir
  Oeu034668.1 169 PVCSCTGTLQQCYRWGCGGWQSACCTTTLSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASEGYNFVNPIDLKAYWAKHGTNKFVTIR 259
                  ******************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MPSVAERDTK PFLTGRDTPV MVAANGAFYP RDCMVTEPPV THMDYVRDSW INHRDKFLHM  60
FPGNLYNPVL METSGNHHSM QMLEQPDSTK DSRVSVEDPS VNKEDEIPSK KRSAAAASPK  120
TPKAKKSKKG LSLPKETGNS SVQRAKTSKK NLDIVINGVD MDISGIPIPV CSCTGTLQQC  180
YRWGCGGWQS ACCTTTLSMY PLPMSTKRRG ARIAGRKMSQ GAFKKVLEKL ASEGYNFVNP  240
IDLKAYWAKH GTNKFVTIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.19e-84BBR-BPC family protein