PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034816.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 386aa MW: 43427 Da PI: 5.4963

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034816.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.3	5.7e-07	16	57	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + r+C+ ++e ++ l+C+ ++ lC C e H+ H Oeu034816.2 16 QDRICDFCGETKALLYCRADSAKLCLGCDREVHSTnqlfkkH 57 689*****99*******************655566666 PP
2	zf-B_box	22	3.4e-07	62	103	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg....Htvvpl 42 C+++++ +++++C + + lC++C e+H + H+++p+ Oeu034816.2 62 LCDKCDSSPVSIYCCTESLVLCQNCDWEKHDNfrliHDRRPI 103 6*****************************889999999886 PP
3	CCT	61.9	2.1e-21	341	383	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R+ al+RYkeK+ktR+F+K+irYesRK++AesR R+KGrF+k Oeu034816.2 341 RDFALSRYKEKKKTRRFDKHIRYESRKVRAESRTRIKGRFAKI 383 67799************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MNFIKEQENN TVTDTQDRIC DFCGETKALL YCRADSAKLC LGCDREVHST NQLFKKHIRC 60 LLCDKCDSSP VSIYCCTESL VLCQNCDWEK HDNFRLIHDR RPIEGFDGCP SVSELMSILG 120 FEDLGKKKML GDGDIEGGNE GLFSELIWET PSIVSLDDLI VSTDNCVDAG HSFQAMGVPP 180 LPKDFVVSPV LLFDYSSLTG VCQNRNAVCG KHRQEILCQL REMAKNEPNF DDLTEDFKPN 240 FTLESQVPGG KFQLKDSCPG LERYVEPALG PYHEENAFLL CGNSGSYIDT NHLVPDKDSD 300 VGDSPFQANG GQEGQSHVPV NSKPFEAIPK VAARELNSQE RDFALSRYKE KKKTRRFDKH 360 IRYESRKVRA ESRTRIKGRF AKIDR*

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MNFIKEQENN TVTDTQDRIC DFCGETKALL YCRADSAKLC LGCDREVHST NQLFKKHIRC  60
LLCDKCDSSP VSIYCCTESL VLCQNCDWEK HDNFRLIHDR RPIEGFDGCP SVSELMSILG  120
FEDLGKKKML GDGDIEGGNE GLFSELIWET PSIVSLDDLI VSTDNCVDAG HSFQAMGVPP  180
LPKDFVVSPV LLFDYSSLTG VCQNRNAVCG KHRQEILCQL REMAKNEPNF DDLTEDFKPN  240
FTLESQVPGG KFQLKDSCPG LERYVEPALG PYHEENAFLL CGNSGSYIDT NHLVPDKDSD  300
VGDSPFQANG GQEGQSHVPV NSKPFEAIPK VAARELNSQE RDFALSRYKE KKKTRRFDKH  360
IRYESRKVRA ESRTRIKGRF AKIDR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	5e-87	CO-like family protein