PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu034892.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 344aa MW: 38072.5 Da PI: 6.5124

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu034892.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	171	225	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++ +++ +++ LA++l+L rqV vWFqNrRa+ k Oeu034892.1 171 RKKLRLSKEQSAYLEENFKEHGTLNLKQKHALAEQLNLRPRQVEVWFQNRRARTK 225 677889***********************************************98 PP
2	HD-ZIP_I/II	115.4	3.3e-37	171	259	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rlskeq++ LEe+F+e+ +L+ ++K++la++L+l+prqv+vWFqnrRARtk+kq+E+dy++Lkr + +l+een+rL+ke eLr + Oeu034892.1 171 RKKLRLSKEQSAYLEENFKEHGTLNLKQKHALAEQLNLRPRQVEVWFQNRRARTKLKQTEVDYKYLKRFCGSLREENRRLHKEILELR-A 259 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MDLGLSLGGA SKDSKTFEFL TENSNSENQS TAINQKDGQV FCMALGLIST VGNQESHENY 60 DRDDDQKLQE SDGIDDHQEK LMKTSVQLDL LPPAPVPRHT GSLLRVAESS EIGSSTHMSL 120 LQPVRGLNAN RPAIVAGGAA EEEVLSANDI LEAERTSSRA SDEDENNHNC RKKLRLSKEQ 180 SAYLEENFKE HGTLNLKQKH ALAEQLNLRP RQVEVWFQNR RARTKLKQTE VDYKYLKRFC 240 GSLREENRRL HKEILELRAL NSTNPFCMQL SATTLTMCPS CEREATTSSA APTTITTAPA 300 VNSPIAKTST IESTHKVIPF PLLRPGFYPF SCSPSHSNQS ASS*

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MDLGLSLGGA SKDSKTFEFL TENSNSENQS TAINQKDGQV FCMALGLIST VGNQESHENY  60
DRDDDQKLQE SDGIDDHQEK LMKTSVQLDL LPPAPVPRHT GSLLRVAESS EIGSSTHMSL  120
LQPVRGLNAN RPAIVAGGAA EEEVLSANDI LEAERTSSRA SDEDENNHNC RKKLRLSKEQ  180
SAYLEENFKE HGTLNLKQKH ALAEQLNLRP RQVEVWFQNR RARTKLKQTE VDYKYLKRFC  240
GSLREENRRL HKEILELRAL NSTNPFCMQL SATTLTMCPS CEREATTSSA APTTITTAPA  300
VNSPIAKTST IESTHKVIPF PLLRPGFYPF SCSPSHSNQS ASS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	228	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	7e-65	HD-ZIP family protein