PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035069.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 248aa MW: 28661.7 Da PI: 9.2046

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035069.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.6	7.1e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev +iifsst klyeyss Oeu035069.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGLIIFSSTEKLYEYSS 59 9***********************************************96 PP
2	K-box	81.9	1.5e-27	78	171	8	99
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + + +++ + +q+e+a L+++++ Lq+++R+l+Ge+L L +++Lq+Le+qLe sl+ +R +K+++l+++i+el k + +++en +L kk++ Oeu035069.1 78 QllNPDSEVKFWQREAAILRQQLHDLQENHRKLMGEELYGLGVEDLQKLENQLEMSLRGVRMRKEQVLTDEIQELNLKGNLIHQENVDLYKKVK 171 234678999*********************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MGRGKIVIQR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGLIIFSS TEKLYEYSST 60 SVKSVIERYS KAKEQHHQLL NPDSEVKFWQ REAAILRQQL HDLQENHRKL MGEELYGLGV 120 EDLQKLENQL EMSLRGVRMR KEQVLTDEIQ ELNLKGNLIH QENVDLYKKV KFIQQENMEL 180 HKKVYGTRDP STANGNGFVP YNSFTVTREL HGPIQLQLSQ PTPNLHTPAR ESESRYFFHV 240 EITVSIQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-107	MIKC_MADS family protein