PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu035144.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 169aa    MW: 17878 Da    PI: 7.4133
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu035144.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB187.21.2e-5834131198
        NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegekk 98 
                  vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plkvyl++yreleg++k
  Oeu035144.1  34 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYRELEGDTK 131
                  69*********************************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MADGRAGGSL GVPGSPGGGG SHDSGGDQSP RSGVREQDRF LPIANISRIM KKALPANGKI  60
AKDAKETVQE CVSEFISFIT SEASDKCQKE KRKTINGDDL LWAMATLGFE DYIDPLKVYL  120
ARYRELEGDT KGSGKGADGS ARKDALVPNP GSQVQLAHQV SFTQGMNY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.11e-75NF-YB family protein