PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu035253.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 615aa    MW: 67935.9 Da    PI: 5.2608
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu035253.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.35.3e-1272476131374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs...elykal.ppsetsekn......sseelaalklfsevs 88 
                  lv+lLl+cAeavs++d  la+++L  l+ l+sp gd++ R+aa+fteAL+ rl+ + +   ++ ++  +       n      s e l++++++++++
  Oeu035253.1 247 LVHLLLACAEAVSKEDYMLARRYLHYLNRLVSPVGDSILRVAACFTEALSIRLVATLTnkpRTTNQNpSF------NpfpdpkSPEILKIYQILYQAC 338
                  68***************************************************99332000222222133......24445559************** PP

         GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                  P++kf+h+taNqaI ea+e++e+vH+iD+di qG Q pa++qaLa+Rp+g+p l+iTgvg+    s e l etg+ La++A++l+vpfef++ v ++l
  Oeu035253.1 339 PYIKFAHFTANQAIFEAFESQECVHVIDLDILQGYQCPAFMQALAARPGGAPFLQITGVGP----SLECLGETGRSLAELAHSLHVPFEFHP-VGEKL 431
                  *************************************************************....9**************************.7**** PP

         GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                  edl++++++ k gE+laVn+v +lh ++    +l     ++L ++++lsP+vv++ve+ea+hn++ Fl rfleal+yysa+fdsl++++p++s +r+k
  Oeu035253.1 432 EDLKPHMFKRKVGEVLAVNSVSRLHCVP--GNCLG----NLLAMIRDLSPNVVTIVEEEASHNGPYFLGRFLEALHYYSAIFDSLDETFPPDSAQRAK 523
                  ***************************9..44444....5********************************************************** PP

         GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  vE+ +++rei+n+vaceg+er+ rhe+l kWr+ +e  GF  vplse+a +q k ll  ++ dgyr+ +++g+l+lgW+dr+++++S W+
  Oeu035253.1 524 VEQYIFAREIRNIVACEGSERVIRHERLVKWRRHMEGKGFIGVPLSENAITQSKILLGLYSCDGYRLTQDHGCLFLGWQDRAILAASTWK 613
                  *****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    
MRSLKSEITG SIASETSNQQ TTEINSWTKQ EHTSSNQSVS ELKKINESTT NLSVPATALK  60
FEVDGHVENQ SPDYSMWESI FSDDQTLQGD FMVFSPARNM SPQASSLLIY SPSRILSPLG  120
QKLGKGLSPL HRVSKSPNIQ YMPLESLSVS ALENIPLDDN CIEDGDLVVF SPMKIVSEDG  180
ESSSNCAFDA LTMVQESLDS STLQNSTTFY GSVVSSASSS LRECSNVSQE NDIYQAGSAE  240
QDGGLHLVHL LLACAEAVSK EDYMLARRYL HYLNRLVSPV GDSILRVAAC FTEALSIRLV  300
ATLTNKPRTT NQNPSFNPFP DPKSPEILKI YQILYQACPY IKFAHFTANQ AIFEAFESQE  360
CVHVIDLDIL QGYQCPAFMQ ALAARPGGAP FLQITGVGPS LECLGETGRS LAELAHSLHV  420
PFEFHPVGEK LEDLKPHMFK RKVGEVLAVN SVSRLHCVPG NCLGNLLAMI RDLSPNVVTI  480
VEEEASHNGP YFLGRFLEAL HYYSAIFDSL DETFPPDSAQ RAKVEQYIFA REIRNIVACE  540
GSERVIRHER LVKWRRHMEG KGFIGVPLSE NAITQSKILL GLYSCDGYRL TQDHGCLFLG  600
WQDRAILAAS TWKC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.17e-96GRAS family protein