PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu035257.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 593aa    MW: 65805.6 Da    PI: 6.2894
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu035257.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS408.94.7e-1252235911374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar...svselykal.ppsetsekn......sseelaalklfsevs 88 
                  lv+lL++cAeavs++   la+++L  l+ l+sp g ++qR+aa+fteAL++rl+    + +++ ++  +       n      s e l++++++++++
  Oeu035257.1 223 LVHLLISCAEAVSKEYYMLARRYLHYLNRLVSPVGHSIQRVAACFTEALSTRLVAtltNNPRTTDQNpSF------NpfpdpkSPEILKIYQILYQAC 314
                  68***************************************************99211222333333233......14445559************** PP

         GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                  P++kf+h+taNqaI ea+e++ +vH+iD+di qG QWp ++qaLasRp+g+p l+iTgvg+    s e l++tg+ L+++A++l+vpfef++ v ++l
  Oeu035257.1 315 PYIKFAHFTANQAIFEAFESQVCVHVIDLDILQGCQWPVFMQALASRPGGAPFLQITGVGP----SLECLRKTGRSLSELAHSLHVPFEFHP-VGEKL 407
                  *************************************************************....9**************************.7**** PP

         GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                  edl++++++ k gE+laVn+v + h ++    +l     ++L ++++lsP+vv++ve+ea+hn++ Fl rfleal+yysa+fdsl++++p++s +r+k
  Oeu035257.1 408 EDLKPHMFKRKVGEVLAVNSVSRHHCVP--GNCLG----NLLAMIRDLSPNVVTIVEEEASHNGPYFLGRFLEALHYYSAIFDSLDETFPPDSAQRAK 499
                  **********************999998..44444....5********************************************************** PP

         GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr..kvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  vE+ +++rei+n+vaceg+er+ rhe+l kWr+ +e  GF  vplse+a +q k l+    ++ +gyr+ +++g+++lgW+dr+++++S W+
  Oeu035257.1 500 VEQYIFAREIRNIVACEGSERVIRHERLVKWRRHMEGKGFIGVPLSETAITQSKILVGlgLYSCNGYRLTQDHGCMLLGWQDRAVLAASTWK 591
                  ********************************************************75216779***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MSNQQTTEIN SWTKQEQTSS NQSVSELKKI NESTTNLSVP ATALKFEVDG HVENQSPDYS  60
MWESIFSDDQ TLQGDFMVFS PARNMSPQAS SLLIYSPPRI LSPLGQILGK RLSPLHRVSN  120
SPNIQYMPLE SLSLSALENI PLDDNFSPMK IVSGDGESSS NCAFDALTMV QESLDSSTLQ  180
NSTTFYGSVV SSASSSIREC SNVSQENGIY QPGSTEQDGG LHLVHLLISC AEAVSKEYYM  240
LARRYLHYLN RLVSPVGHSI QRVAACFTEA LSTRLVATLT NNPRTTDQNP SFNPFPDPKS  300
PEILKIYQIL YQACPYIKFA HFTANQAIFE AFESQVCVHV IDLDILQGCQ WPVFMQALAS  360
RPGGAPFLQI TGVGPSLECL RKTGRSLSEL AHSLHVPFEF HPVGEKLEDL KPHMFKRKVG  420
EVLAVNSVSR HHCVPGNCLG NLLAMIRDLS PNVVTIVEEE ASHNGPYFLG RFLEALHYYS  480
AIFDSLDETF PPDSAQRAKV EQYIFAREIR NIVACEGSER VIRHERLVKW RRHMEGKGFI  540
GVPLSETAIT QSKILVGLGL YSCNGYRLTQ DHGCMLLGWQ DRAVLAASTW KC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.11e-92GRAS family protein