PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035379.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 441aa MW: 48873.7 Da PI: 4.6434

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035379.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.1	1.2e-11	331	373	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L Oeu035379.1 331 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 373 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MLPVAVSNGV VWTEGEEDEE ISWPSKNEME TCNDKDKKAS MSSVKSMLEH EWFINNAMNP 60 PNPDLHMNSQ LPEFSSLLFN PLEEESSCSP SLDPSQSFFP SKSCFPSLFN FVWNQTFDYG 120 FDFSGDMNFF ANQSASSGSV LMGELGPSEP SSEFPTNTRL QSFFDCKTTI GGGPEAFGFE 180 GYGSALFPSK SKGLRPLQGF PPVGLQPTLF QKRAALRQGS SGVDELRNLA LPRFKSGEDS 240 TRMEGSWENR DDAGEMELEK KRKRNFNYEM EENVDVDVLT LNYDSDEPTE NTYNIGDGNV 300 NIGGNNLNAN SSSTVGDHKG KKKGLPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA 360 SILGDAIDYL KELLQRINDI QNELEPTLPG SLMPPSTSFH PLSSTPATLP DHVKEELCSS 420 SLPIPKNQPA KVDFTLVGIL *

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MLPVAVSNGV VWTEGEEDEE ISWPSKNEME TCNDKDKKAS MSSVKSMLEH EWFINNAMNP  60
PNPDLHMNSQ LPEFSSLLFN PLEEESSCSP SLDPSQSFFP SKSCFPSLFN FVWNQTFDYG  120
FDFSGDMNFF ANQSASSGSV LMGELGPSEP SSEFPTNTRL QSFFDCKTTI GGGPEAFGFE  180
GYGSALFPSK SKGLRPLQGF PPVGLQPTLF QKRAALRQGS SGVDELRNLA LPRFKSGEDS  240
TRMEGSWENR DDAGEMELEK KRKRNFNYEM EENVDVDVLT LNYDSDEPTE NTYNIGDGNV  300
NIGGNNLNAN SSSTVGDHKG KKKGLPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA  360
SILGDAIDYL KELLQRINDI QNELEPTLPG SLMPPSTSFH PLSSTPATLP DHVKEELCSS  420
SLPIPKNQPA KVDFTLVGIL *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	321	339	KKKGLPAKNLMAERRRRKK
2	333	340	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-61	bHLH family protein