PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu035396.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 141aa    MW: 16121.1 Da    PI: 9.2011
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu035396.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS21.62.3e-0714110193304
         GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                   ++++++Ea++Vnl +     +  ++sl+     vL +vk+l Pk+vv +++ +d+ + ++ + +      +   +d+++++     ++  k Er+ll
  Oeu035396.1  14 PFQISENEAIVVNLPVGSLVGY--QLSLSL----VLCFVKQLFPKIVVSMDRGCDRIDLPLSNYM-----LFNPSLDTVNMN----MDTLLKKERFLL 96 
                  568999********99555444..666666....**********************888887643.....344455555555....466777799999 PP

         GRAS 291 greivnvvacegae 304
                  + +i+++++   ++
  Oeu035396.1  97 QSKIEKIIMVHFRA 110
                  99999999887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MSIDSLNSRS QFLPFQISEN EAIVVNLPVG SLVGYQLSLS LVLCFVKQLF PKIVVSMDRG  60
CDRIDLPLSN YMLFNPSLDT VNMNMDTLLK KERFLLQSKI EKIIMVHFRA LEKTQHSRTL  120
FLSSRFSPIM FSLYLVEVKI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.19e-22GRAS family protein