PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035607.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 248aa MW: 25632.2 Da PI: 7.3804

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035607.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125.3	3e-39	30	130	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCk+lrrkCa +C+++pyf +eq +++fa+vhk+FGasnv+kll+++ ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael +l Oeu035607.1 30 PCGACKFLRRKCAVGCIFSPYFDSEQgAAHFAAVHKVFGASNVSKLLQHIAANKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELTYL 127 7*********************9989******************************************************************99 PP DUF260 98 kee 100 +++ Oeu035607.1 128 QAH 130 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MSVNPSGNNN GCGGSSSGSS GGTGGGGGGP CGACKFLRRK CAVGCIFSPY FDSEQGAAHF 60 AAVHKVFGAS NVSKLLQHIA ANKRLDAVVT ICYEAQARLR DPVYGCVAHI FALQQQVVNL 120 QAELTYLQAH LAALELPTPL PPPPPLPSLS QPLLVPPATL SILDLPTGPP TYDLSSLFDP 180 IMTMPPRQID RRLFGATRGP PEISSSSRGG GGGGDLQELA CELLYRGEPP TVSCSETSSL 240 PPHSKGN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	7e-64	LBD family protein