PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035698.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 395aa MW: 43604.9 Da PI: 8.9372

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035698.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.5	6.4e-15	335	380	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h E++RR++iN+++ +L+el+P++ +K++K+++Le+A+eY+k Lq Oeu035698.1 335 HRLSEKKRRNEINKRLRTLQELIPNC-----RKVDKSSVLEEAIEYLKTLQ 380 8999*******************9.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MELVWENGEV LIRCPSSSTR DAQLSPSSAK CSSLTKMKRK DGEGNTTDNS KNSNSNSKTL 60 YSTSSLNECF ESYETNQSNP PSVHRSCFSI KKNGENIMES RLIFSKLDNA IGSTSKFAKG 120 ESQPLTECGC VNSLLRDPGK GTRTLKNCLN SLEVMTDGSP ITNTRELKGS ENNKKMDVTS 180 FSRFLRPEVN HSGSGLSAPV SPASRGDLLC AEKSINEEFK VSTSHGSCLL VESTMINCTR 240 GQSALLVAPI DSKPFDSKSN SHPDQQSIVV GCLEESLKFS QGSNNPYTAA RRNYQQTRDQ 300 SEYLSDGDNQ SENVNKSAPA RGKTAVKRKR IAEVHRLSEK KRRNEINKRL RTLQELIPNC 360 RKVDKSSVLE EAIEYLKTLQ LQLLSRLDRT CPIQ*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MELVWENGEV LIRCPSSSTR DAQLSPSSAK CSSLTKMKRK DGEGNTTDNS KNSNSNSKTL  60
YSTSSLNECF ESYETNQSNP PSVHRSCFSI KKNGENIMES RLIFSKLDNA IGSTSKFAKG  120
ESQPLTECGC VNSLLRDPGK GTRTLKNCLN SLEVMTDGSP ITNTRELKGS ENNKKMDVTS  180
FSRFLRPEVN HSGSGLSAPV SPASRGDLLC AEKSINEEFK VSTSHGSCLL VESTMINCTR  240
GQSALLVAPI DSKPFDSKSN SHPDQQSIVV GCLEESLKFS QGSNNPYTAA RRNYQQTRDQ  300
SEYLSDGDNQ SENVNKSAPA RGKTAVKRKR IAEVHRLSEK KRRNEINKRL RTLQELIPNC  360
RKVDKSSVLE EAIEYLKTLQ LQLLSRLDRT CPIQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	327	343	KRKRIAEVHRLSEKKRR
2	328	344	KRKRIAEVHRLSEKKRR
3	340	365	KKRRNEINKRLRTLQELIPNCRKVDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46970.1	2e-20	bHLH family protein