PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035711.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 418aa MW: 45874.6 Da PI: 6.714

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035711.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.3	8.6e-11	352	396	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er RR ri +++ +L+el+P+ + s +++L +Av YIk+Lq Oeu035711.1 352 VAERVRRTRISERMRKLQELVPNM----ERQTSTSDMLDLAVGYIKDLQ 396 78*******************6....578***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MRENMQMQMQ QQVGSGLTRY RSAPSSYLTS ILDSNSSSGG FGGDDFDQIF NTRASSPERQ 60 QIFPRFMNSA DTIKQNYSSN MNLQSQSQLV PPIKNETEVY QPQQQLQRQQ SNDYSSVSQM 120 TYQSHNSGDS SSGMDNCSSR LYGSINSDHV VHMSMDGGGR NSNLIRQSSS PAGLFANINI 180 DNDFGAMRSI GNFAAVNSAS AEASSFSASR FKNQMVFPSM NPSSTGMMTP ISEIGSKSFG 240 ESRPGDGHFQ EDCANDDDYI TGFPVVSWND SSILSDDFVK GLGDDDTKTF SNINASDDQN 300 SEGGNPPTTL LSHHLSLHSS STKISAMEKM LQDSVPCKIR AKRGCATHPR SVAERVRRTR 360 ISERMRKLQE LVPNMERQTS TSDMLDLAVG YIKDLQTQVK TLSDKRAKCS CLAKQKS*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MRENMQMQMQ QQVGSGLTRY RSAPSSYLTS ILDSNSSSGG FGGDDFDQIF NTRASSPERQ  60
QIFPRFMNSA DTIKQNYSSN MNLQSQSQLV PPIKNETEVY QPQQQLQRQQ SNDYSSVSQM  120
TYQSHNSGDS SSGMDNCSSR LYGSINSDHV VHMSMDGGGR NSNLIRQSSS PAGLFANINI  180
DNDFGAMRSI GNFAAVNSAS AEASSFSASR FKNQMVFPSM NPSSTGMMTP ISEIGSKSFG  240
ESRPGDGHFQ EDCANDDDYI TGFPVVSWND SSILSDDFVK GLGDDDTKTF SNINASDDQN  300
SEGGNPPTTL LSHHLSLHSS STKISAMEKM LQDSVPCKIR AKRGCATHPR SVAERVRRTR  360
ISERMRKLQE LVPNMERQTS TSDMLDLAVG YIKDLQTQVK TLSDKRAKCS CLAKQKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	1e-56	bHLH family protein