PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu035824.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 222aa    MW: 24551.3 Da    PI: 5.9189
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu035824.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.69.9e-3971071100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                  +C aCk+lrrkC+++Cv+apyf +eq + +fa++hk+FGasnv+kll++lp + r +a+ +++yeA+ar++dP+yG+v++i++lq+++ +l+a+la+l
  Oeu035824.1   7 PCGACKFLRRKCVEGCVFAPYFSHEQgATHFAAIHKVFGASNVSKLLAHLPVSSRCEAAVTIAYEAQARLQDPIYGCVSHIFALQKEVVNLQAQLASL 104
                  7*************************89********************************************************************99 PP

       DUF260  98 kee 100
                  k++
  Oeu035824.1 105 KKQ 107
                  987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSGSGSPCGA CKFLRRKCVE GCVFAPYFSH EQGATHFAAI HKVFGASNVS KLLAHLPVSS  60
RCEAAVTIAY EAQARLQDPI YGCVSHIFAL QKEVVNLQAQ LASLKKQASQ SSLSGSDNGN  120
PSDKFYDESC SFRQDVQSWF ESCQNQDTMA QMYTNANNSV TDILYPQRGT VNATVKCENP  180
VFPEENISNS SMDSLEIQWQ RPFQNDFDDL QSVAFRYFQH S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.13e-57LBD family protein