PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035881.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NF-X1

Protein Properties

Length: 1125aa MW: 121582 Da PI: 8.0065

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035881.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.3	5.1e-06	314	332	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C++ CH GpC+pC+ Oeu035881.1 314 CGRHHCERVCHVGPCDPCQ 332 ******************6 PP
2	zf-NF-X1	16.1	2.4e-05	378	395	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C ++CH+GpC++C Oeu035881.1 378 CGNHDCPEICHPGPCGEC 395 ****************** PP
3	zf-NF-X1	16.4	2.1e-05	532	550	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C +lCH G CppC Oeu035881.1 532 CGQHSCPSLCHSGHCPPCL 550 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1125 aa Download sequence
MSSSVQNSRR DNNNNRTRNN GFQGSRREWV PRGSAATIPF AVLTPMDGVN SSSVSGNGNG 60 NGPGNDIGNV GEPIHKLVRP IIPNQNRVHV GSRGNPSQHV NQRIERDREI GRESVKQKQK 120 AKVSKNMNMP QLVQEIQEKL LKGSVECMIC YDMVRRSSPI WSCSSCYSIF HLNCIKKWAR 180 APTSTDLSAE KDQGFNWRCP GCQSVQLLSS KEIRYVCFCG KRPDPPSDLY LTPHSCGEPC 240 GKPLEKEVPG TGMSKDDLCP HVCVLQCHPG PCPPCKAFAP PRRCPCKKKV VTTRCSDQKS 300 VLTCGQRCDK LLDCGRHHCE RVCHVGPCDP CQVLVNAACF CKKKIEVVLC GDMVVKGEFK 360 VEDGVFSCSS ICEKKLKCGN HDCPEICHPG PCGECEFLPG KIETCCCGKA SLKEGRQSCL 420 DLIPTCSQIC GKILPCGLHS CLNVCHSGVC PPCPVLVSQK CRCGSTSRTV ECYKTVTGSE 480 IFTCDKPCGR KKNCGRHRCN ERCCPLSNSN NSPSVDWNPH LCLMPCEKKL RCGQHSCPSL 540 CHSGHCPPCL ETIFIDLTCA CGRTSIPPPL PCGTPAPSCQ YHCSVPQPCG HPSSHSCHFG 600 ECPPCSVPIA KECVGGHVIL RNIPCGSKDI RCNKLCGKTR QCGLHACSRT CHPLPCDSSA 660 GSTTGATASC GQTCGAPRSD CRHTCTALCH PFSPCPDVRC EFSVTITCSC GRITATVPCD 720 AGGSNGGYNV DTVLEASIIQ KLPVPLQPVE GNGKRIPLSQ RKLVCDDECT KTERKKVLAD 780 AFGVTSPNLD AFHFGESMSI SEVLSELLRR DPKWVLSVEE RCKYLVLGRG RSGVNALKVH 840 VFCPMLKEKR DAVRLIAERW KLSVNAAGWE PKRFIVVHVT PKSKAPARVL GVKCSNPSSM 900 LQPPNFDPLV DMDPRLVVAL FDMPRDSDIS ALVLRFGGEC ELAWLNDKNA LAVFSDPARA 960 ATAMRRLDQG SVYHGAVVVP QIGGASATTS GANAWGSSVA SKDGSGMASL KGNPWKKVVV 1020 QDPDWKDGFW VGEEWSGTAT DSDLKGKEAP IAASANMWSV LDSESTLKLS AASVKKEDLL 1080 KQPENSSVSA TNPEGSGSNL PALQEGTSVE CSDDVVDDWE EAYD*

Sequence ? help Back to Top

Protein Sequence Length: 1125 aa Download sequence

MSSSVQNSRR DNNNNRTRNN GFQGSRREWV PRGSAATIPF AVLTPMDGVN SSSVSGNGNG  60
NGPGNDIGNV GEPIHKLVRP IIPNQNRVHV GSRGNPSQHV NQRIERDREI GRESVKQKQK  120
AKVSKNMNMP QLVQEIQEKL LKGSVECMIC YDMVRRSSPI WSCSSCYSIF HLNCIKKWAR  180
APTSTDLSAE KDQGFNWRCP GCQSVQLLSS KEIRYVCFCG KRPDPPSDLY LTPHSCGEPC  240
GKPLEKEVPG TGMSKDDLCP HVCVLQCHPG PCPPCKAFAP PRRCPCKKKV VTTRCSDQKS  300
VLTCGQRCDK LLDCGRHHCE RVCHVGPCDP CQVLVNAACF CKKKIEVVLC GDMVVKGEFK  360
VEDGVFSCSS ICEKKLKCGN HDCPEICHPG PCGECEFLPG KIETCCCGKA SLKEGRQSCL  420
DLIPTCSQIC GKILPCGLHS CLNVCHSGVC PPCPVLVSQK CRCGSTSRTV ECYKTVTGSE  480
IFTCDKPCGR KKNCGRHRCN ERCCPLSNSN NSPSVDWNPH LCLMPCEKKL RCGQHSCPSL  540
CHSGHCPPCL ETIFIDLTCA CGRTSIPPPL PCGTPAPSCQ YHCSVPQPCG HPSSHSCHFG  600
ECPPCSVPIA KECVGGHVIL RNIPCGSKDI RCNKLCGKTR QCGLHACSRT CHPLPCDSSA  660
GSTTGATASC GQTCGAPRSD CRHTCTALCH PFSPCPDVRC EFSVTITCSC GRITATVPCD  720
AGGSNGGYNV DTVLEASIIQ KLPVPLQPVE GNGKRIPLSQ RKLVCDDECT KTERKKVLAD  780
AFGVTSPNLD AFHFGESMSI SEVLSELLRR DPKWVLSVEE RCKYLVLGRG RSGVNALKVH  840
VFCPMLKEKR DAVRLIAERW KLSVNAAGWE PKRFIVVHVT PKSKAPARVL GVKCSNPSSM  900
LQPPNFDPLV DMDPRLVVAL FDMPRDSDIS ALVLRFGGEC ELAWLNDKNA LAVFSDPARA  960
ATAMRRLDQG SVYHGAVVVP QIGGASATTS GANAWGSSVA SKDGSGMASL KGNPWKKVVV  1020
QDPDWKDGFW VGEEWSGTAT DSDLKGKEAP IAASANMWSV LDSESTLKLS AASVKKEDLL  1080
KQPENSSVSA TNPEGSGSNL PALQEGTSVE CSDDVVDDWE EAYD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein