PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035889.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 406aa MW: 45104.6 Da PI: 7.4987

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035889.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.4	3.4e-10	257	305	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq Oeu035889.1 257 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 305 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MDSEDNGNRG FQQRKGDSIL NCPSSGIVTN SIYEKVPGMG MSSETMFKST NGVEPFYGSG 60 WDTIVSLNTS GNFGGSSVVP QNEFANSHYS HFPSRSGLVD MMPKIPSFGS GSYSEMVTSF 120 QMPECGRITE TSHRPNYARN NLDGVERALT NVADSQEHCQ NSEDGLVGVS PNGKKRRKAS 180 MGASHKNVEV EHQKDPSEDT SEFPNEDDDK KQKFEQNVGS NLHNKQAVKQ AKDNSATAES 240 SKENYIHVRA KRGQATNSHS LAERVRRERI SERMRLLQEL VPGCNKITGK AVMLDEIINY 300 VQSLQQQVEF LSMKLATVNP ELDADIDRIL SKDILQFRGN NPAALGIGSS RVLILPYLRL 360 CGTMIFKVFS KWDSMLILQA AIWDQMDCRK WSYRICSKAQ IYCSG*

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MDSEDNGNRG FQQRKGDSIL NCPSSGIVTN SIYEKVPGMG MSSETMFKST NGVEPFYGSG  60
WDTIVSLNTS GNFGGSSVVP QNEFANSHYS HFPSRSGLVD MMPKIPSFGS GSYSEMVTSF  120
QMPECGRITE TSHRPNYARN NLDGVERALT NVADSQEHCQ NSEDGLVGVS PNGKKRRKAS  180
MGASHKNVEV EHQKDPSEDT SEFPNEDDDK KQKFEQNVGS NLHNKQAVKQ AKDNSATAES  240
SKENYIHVRA KRGQATNSHS LAERVRRERI SERMRLLQEL VPGCNKITGK AVMLDEIINY  300
VQSLQQQVEF LSMKLATVNP ELDADIDRIL SKDILQFRGN NPAALGIGSS RVLILPYLRL  360
CGTMIFKVFS KWDSMLILQA AIWDQMDCRK WSYRICSKAQ IYCSG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	179	GKKRRKA
2	174	178	KKRRK
3	174	213	KKRRKASMGASHKNVEVEHQKDPSEDTSEFPNEDDDKKQK
4	175	214	KKRRKASMGASHKNVEVEHQKDPSEDTSEFPNEDDDKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	5e-58	bHLH family protein