PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu035938.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 387aa MW: 41916.5 Da PI: 6.3532

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu035938.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +v+++G g+W++ +++ g+ R++k+c++rw +yl Oeu035938.1 14 KGPWTPEEDQKLLAYVEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.6e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l Oeu035938.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYVE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG 120 IDPVTHKPKN DALKLSDGQS KNAANLSHMA QWESARLEAE ARLVRQSKLR SSEFSPSTSS 180 PMNKPVGLPG PARCLDILKA WNGGGAMVGL GCELESPTST LSYSENAPPM STTGIGENST 240 AFVDFVGNSS GSSETGIMKE EGEEDWKGFG NSTNLPEYRD GIANSVSFTS GIHDISLPVE 300 NAWESESLRV NSEHIPSGNF VQRFTDLLLS TAGADHSFSG DDCSLSGDGG GESDNGGGPS 360 GSGNDKNYWN SILNLVNSSN SDSPMF*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYVE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG  120
IDPVTHKPKN DALKLSDGQS KNAANLSHMA QWESARLEAE ARLVRQSKLR SSEFSPSTSS  180
PMNKPVGLPG PARCLDILKA WNGGGAMVGL GCELESPTST LSYSENAPPM STTGIGENST  240
AFVDFVGNSS GSSETGIMKE EGEEDWKGFG NSTNLPEYRD GIANSVSFTS GIHDISLPVE  300
NAWESESLRV NSEHIPSGNF VQRFTDLLLS TAGADHSFSG DDCSLSGDGG GESDNGGGPS  360
GSGNDKNYWN SILNLVNSSN SDSPMF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-113	MYB family protein