PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu036090.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 288aa MW: 32033.1 Da PI: 6.5125

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu036090.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.8	4.6e-35	24	145	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........... 88 + +kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++ +a++++ +++s+s+ +ss + Oeu036090.1 24 TSQKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIEKAKDAIDKLDALPPWHANDTSVAQNSESNPSSSGTkvkiqsdssfi 121 679*************************************************************7777766633333333332222234444444455 PP TCP 89 .........kaaksaakskksqks 103 + +ks ++++s +s Oeu036090.1 122 qpesdtefmNTMKSFFPTSSSAAS 145 555544443222222233333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MGMKGKGIEG EIVQVQGGHI LRSTSQKDRH SKVYTAKGPR DRRVRLSAHT AIQFYDVQDR 60 LGYDRPSKAV DWLIEKAKDA IDKLDALPPW HANDTSVAQN SESNPSSSGT KVKIQSDSSF 120 IQPESDTEFM NTMKSFFPTS SSAASLMNFQ NFPHDIMSRA SFQAEDLGLS LHTLQDQNSR 180 PSTNPDPSGS TFQDNYQKMD SWSANGSVEN RVGFHIDSHT VPQVQQAFIS QDLPFSNREL 240 LQSNYSNFIQ HNQQPSVHQS SDSGSHFAFG FQVPARIHGE DKPETQN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	4e-53	TCP family protein