PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu036680.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 519aa MW: 55175.4 Da PI: 7.1623

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu036680.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.7	1e-38	139	252	2	95
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++ k+ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+eWLl qa+pai+++tgt++++a+ + + s +ss+s+ s++ Oeu036680.2 139 PPPKKVTKDRHTKVDGRGRRIRMPAICAARVFQLTKELGHKSDGETVEWLLHQAEPAIIAATGTGTIPANIStLNISLRSSGSTLSAPssksaphsfh 236 567999***************************************************************88876667777766444444444455555 PP TCP 89 .........kaaksaa 95 ++++++ Oeu036680.2 237 galgltqqpYEENFSQ 252 5555555553333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MELTDSRNNK QINTSTSCAS TSVTSGATTS ATYFLTPSHH LLQRLHPNAH HQQYEHGQSS 60 QFITNSSVGG VTGGASSSAS STTSASTYST SQTPQPPEVV DASLAIATGS ETLVDSSKKS 120 HNQLQIALQP QEQQVQTQPP PKKVTKDRHT KVDGRGRRIR MPAICAARVF QLTKELGHKS 180 DGETVEWLLH QAEPAIIAAT GTGTIPANIS TLNISLRSSG STLSAPSSKS APHSFHGALG 240 LTQQPYEENF SQMLGFRHHQ QQQHPHLLQA TQIAESLASG SGGGGGDGSD GGGQEPNENY 300 LHKRYREDLF KEEGTNNSQG EGSDSPSHKQ FKGNNLQILQ KSHESPANGQ SSPSLIRHTN 360 MMPATAMWAV APAPSSGTTA GGGAFWMLPF TSGNNGQALT AAATPVTSPQ MWQFPGGNSL 420 QTPLHFMPRF NYSGNPDFQG GRSSPLQLGS MLMQQQQTAS QYLGLNVSGE TNLGMLAALN 480 AYSRGGLNMS SDQFEHHQQQ QQQPQDSKSG EDGQNASQ*

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MELTDSRNNK QINTSTSCAS TSVTSGATTS ATYFLTPSHH LLQRLHPNAH HQQYEHGQSS  60
QFITNSSVGG VTGGASSSAS STTSASTYST SQTPQPPEVV DASLAIATGS ETLVDSSKKS  120
HNQLQIALQP QEQQVQTQPP PKKVTKDRHT KVDGRGRRIR MPAICAARVF QLTKELGHKS  180
DGETVEWLLH QAEPAIIAAT GTGTIPANIS TLNISLRSSG STLSAPSSKS APHSFHGALG  240
LTQQPYEENF SQMLGFRHHQ QQQHPHLLQA TQIAESLASG SGGGGGDGSD GGGQEPNENY  300
LHKRYREDLF KEEGTNNSQG EGSDSPSHKQ FKGNNLQILQ KSHESPANGQ SSPSLIRHTN  360
MMPATAMWAV APAPSSGTTA GGGAFWMLPF TSGNNGQALT AAATPVTSPQ MWQFPGGNSL  420
QTPLHFMPRF NYSGNPDFQG GRSSPLQLGS MLMQQQQTAS QYLGLNVSGE TNLGMLAALN  480
AYSRGGLNMS SDQFEHHQQQ QQQPQDSKSG EDGQNASQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-58	TCP family protein