PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037157.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 204aa    MW: 22079.2 Da    PI: 4.9955
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037157.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601352.9e-42481471100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrr+C+++Cvlapyfp ++p kf ++hk+FGasn++kll++lpe +r da++s+vyeA+ar+rdPvyG++g i +lq+++++l+aela+++
  Oeu037157.1  48 PCAACKILRRRCVDKCVLAPYFPPSEPLKFTIAHKVFGASNIIKLLQELPEAQRADAVNSMVYEANARLRDPVYGCAGSICQLQKKISELQAELAKAQ 145
                  7***********************************************************************************************99 PP

       DUF260  99 ee 100
                  +e
  Oeu037157.1 146 AE 147
                  87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MECRETVTAT TVTSSAMMAA SSPSSLSPIS SPTGSFSSSP PPAIIVSPCA ACKILRRRCV  60
DKCVLAPYFP PSEPLKFTIA HKVFGASNII KLLQELPEAQ RADAVNSMVY EANARLRDPV  120
YGCAGSICQL QKKISELQAE LAKAQAEILN LQCQNANLVE FICQEMSQNQ ENCPQEQPND  180
SSPLFFDDWV WLGSPSGHEN LIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.16e-51LBD family protein