PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037174.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family AP2
Protein Properties Length: 232aa    MW: 27331.3 Da    PI: 10.812
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037174.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.96.1e-1455114155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+++GV+ ++++gr++A+++d  s+n    k+ k+++lg ++ ++ Aa+a++ a++k++g
  Oeu037174.1  55 SRFRGVSKHRWTGRYEAHLWDkLSWNVtrkKKgKQVYLGAYDDEKAAARAYDLAALKYWG 114
                  789******************888844444446**********99************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAIAMAMAML MSEENLGRRL MCMEDGEVPE VRCRFKRRKR ETEKEVDPTP VKRSSRFRGV  60
SKHRWTGRYE AHLWDKLSWN VTRKKKGKQV YLGAYDDEKA AARAYDLAAL KYWGWGTSTF  120
TNFPISDYKE EIKFMQTVTK EEYLASLRRK SSGFSRGVSK YRGVARHRRW EARIGRVFGN  180
QYLDLGTYSK SHHPTKHTSW FLSSVHIFHG TLNFRTTHFM NFFQNLTKTR F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.23e-59AP2 family protein