PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu037275.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 273aa MW: 28755.5 Da PI: 6.3963

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu037275.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	109	131	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F++ L H +H Oeu037275.1 109 YSCSVCNKAFPTYQALGGHKASH 131 99***********9999998887 PP
2	zf-C2H2	13.5	0.00022	171	193	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+ksF++ L H r+H Oeu037275.1 171 HECSVCHKSFPTGQALGGHKRRH 193 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MALEALNSTA PGLGYEDAER NLDSWTKRKR SKRARSESEN PPTDEEYLAL CLIMLARSGG 60 DRGGATASPS DNTSSPSDTT AIDDIKKQTE NSTPPPPPPS PPTTQNQSYS CSVCNKAFPT 120 YQALGGHKAS HRKNSTAIAP DDGNPSTSTS TANAASTASN VSALNPTGRL HECSVCHKSF 180 PTGQALGGHK RRHYEGTIGG GGGSSKSGVT TSDSGVASHA PRDFDLNLPA TPEFQLELTV 240 DFEKKSQFLG DQEVESPMPS KKPRLTLFDD GF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	3e-33	C2H2 family protein