PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037300.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 682aa    MW: 75417.2 Da    PI: 8.6407
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037300.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.72.5e-24110211199
                  EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                  f k+lt+sd+++ g +++p+ +ae++      +++++ + t++ +d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD+vvF   + +++  
  Oeu037300.1 110 FAKTLTQSDANNGGGFSVPRYCAETIfprldySSDPPLQ-TVIAKDVHGKTWKFRHIYRGTPRRHLLTTGWSCFVNQKKLAAGDSVVFL--RAENGDI 204
                  89*****************************96666664.9************************************************..3488889 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  +v+++r+
  Oeu037300.1 205 CVGIRRA 211
                  ****996 PP
2Auxin_resp105.65.8e-35273353483
   Auxin_resp   4 aastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                   a+++++Fev Y+Pra+t+eF+vk+++v +a+k+++  GmRfkmafetedss++++ +Gt++  + +dpvrWpnS Wr+L+
  Oeu037300.1 273 LATSGQPFEVAYYPRAGTPEFCVKASSVGAAMKIQWLSGMRFKMAFETEDSSRISWfMGTIACAQVADPVRWPNSLWRLLQ 353
                  67899**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    
MEGVFEKSLD SELWHACAGG MVQMPSVNSK VFYFPQGHAE HTLMEFPALP RIPPMILCRV  60
AAVKFLADPE TDEVYAKMRL IPVVNSDYSL DDDVGLGGNG SVMNEKPTSF AKTLTQSDAN  120
NGGGFSVPRY CAETIFPRLD YSSDPPLQTV IAKDVHGKTW KFRHIYRGTP RRHLLTTGWS  180
CFVNQKKLAA GDSVVFLRAE NGDICVGIRR AKRDGSIGGH ESSSRWNSSG CAGNYRYFSA  240
FDSKLMHRSG NNGSLRAERS KVKPESVMEA IFLATSGQPF EVAYYPRAGT PEFCVKASSV  300
GAAMKIQWLS GMRFKMAFET EDSSRISWFM GTIACAQVAD PVRWPNSLWR LLQVRWDEPD  360
MLQNVKRVSP WLVEMVSNIP AIHPSPYSPP RKKFRLPHHP VFPLDDQFPM PSFTGNPLGP  420
SGPLRSLSKD INAGIQGTRH AQIRAPISDH LNNKLQLGLL PPSFPRLDLH AKIADGIVRS  480
HDGNEDISSL LSMGNSSQKS KKADTVMTPR FILFGQPILT EQQMSRDCSS DVSEVLSGKN  540
SPSLPKSLSS TKQGFHAAEL GLGTGHCKVF LESDDVGRIL QLSALVSYEE LYKMLGNMFE  600
IERLEMLSYV FYHDVTGAVK QVGEEPFSEF TKKAKRLTIL MKPGISDVER KLITGLPTSE  660
RGLDSSNQTG PPWAYLLSTS I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28350.10.0ARF family protein