PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037316.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 539aa    MW: 61154.1 Da    PI: 6.9596
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037316.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS272.31.5e-831665341372
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetseknsseelaalklfsevsPilkfshl 96 
                  lv+ Ll+ Ae v +++ e+a +lL +   ++s++g+p+qRl++yf eAL +++ r++ ++  +   + se++ k  + + ++l +f    P+ +++ +
  Oeu037316.1 166 LVQILLSSAEKVGEKQYERAIKLLRECDRMSSSEGTPVQRLVFYFSEALYEKIDRETGRITPKGlgKKSEDPLKALKCKDSILIAFCYELPLARVTSF 263
                  6899***************************************************66665544313333333333444444444598899******** PP

         GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                  +a qa++e ++++++vHiiD++i +G++ ++L+qaL++R  ++  +l iT+vg    +ske+leetg+rL++fA++l+ +f+fn++v++++ dl+++ 
  Oeu037316.1 264 AAIQALVEHLAEARKVHIIDLEIRNGIHCITLMQALSTRCkNPIEHLTITAVGI---KSKEKLEETGRRLTSFAQSLNFHFSFNIVVEEDILDLNIDL 358
                  ***************************************945556********9...68*************************************** PP

         GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                  ++++++Ea+aV  +++l ++       +++ +++++++++++P v++v+e ea++ns+ F++rf+e+l yy a+fd+l+  + +++++r+  E  + +
  Oeu037316.1 359 FKFDTDEAVAVYAAYALTTMI----GCPDRLKHIMEVIRTINPCVMIVTEIEANCNSPIFVDRFVESLFYYGAFFDTLADCMKNDEKNRRDAESTCCS 452
                  ********************9....44455667***************************************************************** PP

         GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                   +i+n+v ++g+er+ rh +++ Wr+ +e++ + +++ls + + qa+l+l+++  ++  + + + ++l++gWk+ pL+s+Sa
  Oeu037316.1 453 SAIRNIVGTQGKERKVRHVSVNVWRAFFERFQLVEIELSMSSMYQANLVLKNFTsGNSTTFDMNGKCLTIGWKGTPLTSISA 534
                  ******************************************************888888999999***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MDSFEVRDSI PQPGPFTSEF HIDQQLQQFT DFGSFDDLYL DVVSPPFQSF DDDFWKLINV  60
KSQDSELIEP EKKRQYAIPP RSLEILKKYG NKQRRLNGKR INVSSYEMQR SSFSFSALSA  120
EIIIKLAAEK FIRSNSRNSS EISMLSHPCT GSILGPSTVD SKEIQLVQIL LSSAEKVGEK  180
QYERAIKLLR ECDRMSSSEG TPVQRLVFYF SEALYEKIDR ETGRITPKGL GKKSEDPLKA  240
LKCKDSILIA FCYELPLARV TSFAAIQALV EHLAEARKVH IIDLEIRNGI HCITLMQALS  300
TRCKNPIEHL TITAVGIKSK EKLEETGRRL TSFAQSLNFH FSFNIVVEED ILDLNIDLFK  360
FDTDEAVAVY AAYALTTMIG CPDRLKHIME VIRTINPCVM IVTEIEANCN SPIFVDRFVE  420
SLFYYGAFFD TLADCMKNDE KNRRDAESTC CSSAIRNIVG TQGKERKVRH VSVNVWRAFF  480
ERFQLVEIEL SMSSMYQANL VLKNFTSGNS TTFDMNGKCL TIGWKGTPLT SISARKFQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.13e-47GRAS family protein