PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu037430.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 341aa MW: 37955.8 Da PI: 9.9535

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu037430.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.4	1.1e-19	40	130	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 +W+++e+ aLi+a+r+++ +lrrg+l++ +W+ev++ + + + ++++qC++k+e+l+kry+ + ++ + ss++++f++++ Oeu037430.1 40 CWSHDETVALIDAYRDKWYSLRRGNLRASHWQEVADEIadrCSSSIPKTAVQCRHKMEKLRKRYRSEIQRTAPYggPRRISSSWVHFQSMH 130 8***********************************6665677899*************998887654335788999***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MASTLSPSSS SPYNDHIPTA TIALPSIASN SASRRLPPPC WSHDETVALI DAYRDKWYSL 60 RRGNLRASHW QEVADEIADR CSSSIPKTAV QCRHKMEKLR KRYRSEIQRT APYGGPRRIS 120 SSWVHFQSMH SMEKGPNPSP PYSDDEPQGE EDHKSSITRI NDAHNNNYSH QKGNFSNQGL 180 MGNGTTSGFR IKIPGKASAG YSAPKVYGKL NEMGGQNPNN PHTKINSSTN GFGVSGKFSR 240 DGFMGRDEIG KGIGDIAKKK KWDNGMDEVV AAIETLGEGF VRMEKVKMDM AREVEQMRMQ 300 MELKRTEMIL ESQQRIVEAF ANAVSDRKPK KAKKMSMPDC *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	287	KKKKWDNGMDEVVAAIETLGEGFVRMEKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	1e-66	Trihelix family protein