PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037583.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 143aa    MW: 16559.5 Da    PI: 9.9405
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037583.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1028.6e-321111258369
         GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354
                  +eal+yysa++ds +a lp+ + +r+k+E+ ++ +ei+n+v+ eg  r e+he++ +Wr+r+++aGF+p++l+ +a  qak  l++    +gy++ e+
  Oeu037583.1   1 MEALHYYSAILDSPDAMLPKYDTKRAKMEQYYFVEEIKNIVSYEGLGRMEKHERVDQWRRRISQAGFQPAQLKMFA--QAKQWLNNGIaCEGYTIVEK 96 
                  69**********************************************************************9876..67777766555********* PP

         GRAS 355 sgslvlgWkdrpLvs 369
                  +g+lvlgWk++ +v+
  Oeu037583.1  97 KGCLVLGWKSKLIVT 111
                  **********98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MEALHYYSAI LDSPDAMLPK YDTKRAKMEQ YYFVEEIKNI VSYEGLGRME KHERVDQWRR  60
RISQAGFQPA QLKMFAQAKQ WLNNGIACEG YTIVEKKGCL VLGWKSKLIV TAFLLEMLKI  120
ISFSKLYVGL SLTKIRLKNT QQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.16e-22GRAS family protein