PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037790.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 428aa    MW: 48808.7 Da    PI: 4.8438
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037790.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS255.71.7e-78494102373
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                  ++lLl  Aea+++++   a++++++l++l s +    +p+ Rla yfte+L  + ++     +  l+ ++   k+  ++++a+++++e+sP++kf+h+
  Oeu037790.1  49 TDLLLLGAEAIEAENWIFASSVVTKLNNLLSDEEngdNPIGRLALYFTEGLIYKSLD-----FPELQEETFGGKSNHNTFSAFQMLQELSPYVKFAHF 141
                  6789999**********************554431257*************999998.....556666777767788999****************** PP

         GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  taNqaIlea+ g+++vH+iDfdi++G+QWp+L+  La    + +slRiT+v+  ++++  ++++++ rL++fA+++++pf+f+ + ++  ++ ++ee+
  Oeu037790.1 142 TANQAILEATRGHKEVHVIDFDIMEGIQWPSLMVDLAGT--EDASLRITAVVT-DHKNLGNIQQMRLRLQDFANSINLPFNFDHVFMT--TEKDFEEI 234
                  *************************************95..5679********.677999***********************96444..45567*** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe...adh.nsesFlerflealeyysalfdsleaklpres.eerikvEr 287
                  +v++  ++a ++ +qlh  + ++ ++ +   ++Lk v++l Pk+v++ve+e   +d  +s s++e f eal++y+a+ dsl+++++     + + +Er
  Oeu037790.1 235 KVENSTVIANCMLHQLHM-PYKDSAMVK---TFLKGVRKLCPKIVILVEEElfnLDKvSSMSYVEFFREALHHYAAVSDSLQSGFHGGFkLAVKIIER 328
                  *99887776555555555.555555555...6*******************7665556899********************888877764788899** PP

         GRAS 288 ellgreivnvvacegaerrerhetlekWrerl.eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  ++l+ +i + v +   e+rer+     W++   ++ GF+p+pls+ +++qak l++ +++  y v++e+  l l+Wk+rpL+++S W
  Oeu037790.1 329 KFLRTRILDSVKQFPCEQRERQL----WKNEYpSMEGFRPIPLSSWNVSQAKFLVSLFSGS-YWVQNERCRLALCWKSRPLTTASIW 410
                  ***************99777766....998772568***********************66.9************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MDLDFIEEDA VLGLDENIQE TTLLAAAACE EILHNVETQE DGLEGCGLTD LLLLGAEAIE  60
AENWIFASSV VTKLNNLLSD EENGDNPIGR LALYFTEGLI YKSLDFPELQ EETFGGKSNH  120
NTFSAFQMLQ ELSPYVKFAH FTANQAILEA TRGHKEVHVI DFDIMEGIQW PSLMVDLAGT  180
EDASLRITAV VTDHKNLGNI QQMRLRLQDF ANSINLPFNF DHVFMTTEKD FEEIKVENST  240
VIANCMLHQL HMPYKDSAMV KTFLKGVRKL CPKIVILVEE ELFNLDKVSS MSYVEFFREA  300
LHHYAAVSDS LQSGFHGGFK LAVKIIERKF LRTRILDSVK QFPCEQRERQ LWKNEYPSME  360
GFRPIPLSSW NVSQAKFLVS LFSGSYWVQN ERCRLALCWK SRPLTTASIW VPKSIENQRK  420
DQFLFNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.13e-48GRAS family protein