PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037912.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 145aa    MW: 15991.3 Da    PI: 5.5204
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037912.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26055.22.1e-1715645100
       DUF260  45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                  +l ++p+++r da+++l+yeA +r++dPvyG+vg+i++lqqq+ +l+aela+++++
  Oeu037912.1   1 MLLRIPPHKRFDAVATLCYEALVRVKDPVYGCVGHIFTLQQQVVNLQAELAYVQAR 56 
                  567899**********************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MLLRIPPHKR FDAVATLCYE ALVRVKDPVY GCVGHIFTLQ QQVVNLQAEL AYVQARISTL  60
HRIPPPPPPP PPQPPSLSCS NVQSALGFIS NIMTHFETSQ CEETSTEVAS FCNAVDEELE  120
DGDLQSLYIS RCLDVVKFRP STSH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.13e-30LBD family protein