PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038316.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 279aa    MW: 32169.8 Da    PI: 8.9043
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038316.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.24.6e-28959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krienk+ rqvtfskRr+g+lKK +ELSvLCda++ +i+fss+gkl+eyss
  Oeu038316.1  9 KRIENKTSRQVTFSKRRTGLLKKTHELSVLCDAQIGLIVFSSKGKLFEYSS 59
                 79***********************************************96 PP
2K-box52.22.7e-18901751195
        K-box  11 eakaeslqqelakLkkeienLqreqRhllGe.dLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                  ++ +e+l++e++++k+++  Lq +  +++G+ d++sL+l+eL +Le+qLe s++k+R++K +ll eqie+l+k e+ l++en+++ 
  Oeu038316.1  90 SNYNEQLHTEMKRMKRKTIDLQLSVQRYQGNvDMNSLKLEELVELEHQLEISVNKVRARKFQLLNEQIENLKKTENLLEKENQDMY 175
                  5668899***************99999999779*************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGRGKIEVKR IENKTSRQVT FSKRRTGLLK KTHELSVLCD AQIGLIVFSS KGKLFEYSSS  60
PSSMRQIIER YMQAKGTSIL QRDTGMGEVS NYNEQLHTEM KRMKRKTIDL QLSVQRYQGN  120
VDMNSLKLEE LVELEHQLEI SVNKVRARKF QLLNEQIENL KKTENLLEKE NQDMYHWLMN  180
SHIQSQAEAM EHHHLHHQQA MTELRLLEEQ PLLNQLQVFG QDLQPSANAI PMLQLGTLPL  240
NNNSYHLQPT HPNLQESGLQ GFPYAEIRID SIKTGSVQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.22e-49MIKC_MADS family protein