PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038393.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 272aa MW: 28495.6 Da PI: 9.8076

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038393.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.9	3e-37	34	133	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssas....nsssg... 88 +kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+ a+p+i+++tgt++++a+++ + +sss+ s ++ + Oeu038393.1 34 VKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRHAEPSIIAATGTGTTPANFStvsasTRSSSSV--SaaldHK--Shsh 127 699************************************************************99999777443221111111..1222211..1223 PP TCP 89 .....k 89 + Oeu038393.1 128 sqsllA 133 334441 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MSTSAADGNG DGGAIIDPSQ RAGGNGNNNG ALGVKKPPAK DRHSKVDGRG RRIRMPIICA 60 ARVFQLTREL GHKSDGQTIE WLLRHAEPSI IAATGTGTTP ANFSTVSAST RSSSSVSAAL 120 DHKSHSHSQS LLAPTPFLLG KRLRPDDEEQ HQHHISKDDV TAAVGPTVAA GGFWALPARS 180 DFGQVWSFAA PPGEMVVAAA ASNNPQQQQQ PSASLRFLQQ QQPLGMGEAS AARVGNYLPI 240 AQVQGHHLNL LASLSGHPPQ SSEQRREGDA N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-66	TCP family protein