PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038409.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 248aa    MW: 29258.8 Da    PI: 7.7401
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038409.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-17449147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ed++l ++v+++G+++W++Ia++++ gR++k+c++rw++ 
      Oeu038409.1  4 RGHWRPAEDDKLRELVERYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49
                     899*****************************.***********996 PP
2Myb_DNA-binding57.72.7e-185699146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     r ++T+eE+e+l+ +++ +G++ W+ Iar ++ gRt++ +k++w+ 
      Oeu038409.1 56 RSPFTEEEEERLLACHRIHGNR-WAIIARLFP-GRTDNAVKNHWHV 99
                     789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MCSRGHWRPA EDDKLRELVE RYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFT  60
EEEEERLLAC HRIHGNRWAI IARLFPGRTD NAVKNHWHVI MGRKWRERSK IYAKRSAQAL  120
GNDQKPSSNQ DIPVFDEKSL SFNPLVEKYP QKFEYPLTYS QPLHRKELHS DNMVHHMEID  180
EDRRKPTIEF YDFLQVNSDN SNRNEVIEHA KKLDDEDVEQ ELVAVQNQTK EAAAVQFINF  240
LSVQRDS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.12e-84MYB family protein