PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038428.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 524aa    MW: 60785.7 Da    PI: 5.7009
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038428.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.41.9e-1395154266
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                  W+++evlaL+++ +++++++++       We+vs+k++e gf+rs+ +Ckek+e+ ++ +  i  
  Oeu038428.2  95 WSHNEVLALLRIGSSIGNWFSDF-----TWEHVSRKLAELGFKRSADKCKEKFEEESRNFNSISY 154
                  *********************98.....9****************************99988765 PP
2trihelix86.92.5e-27420504185
     trihelix   1 rWtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                  rW ++evlaLi++r +++++ + ++  k+plWe++s+ m e g+ r++k+Ckekwen nk+++k+k+++kkr s +s+tcpyf+ql
  Oeu038428.2 420 RWARDEVLALINLRCKLNNNDEiKDGEKGPLWERISQGMLELGYGRNAKRCKEKWENTNKYFRKTKDSSKKR-SLDSRTCPYFQQL 504
                  8***************999888457799*******************************************8.9999********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MFDGMQSGDQ FHQFIASSRT SFPIPLSFPL NGSDASVIHS FDPFTSHQLH LQLESSINNR  60
VEQDYEEPAS LISTKLVLER ERSMPETTMT TDLGWSHNEV LALLRIGSSI GNWFSDFTWE  120
HVSRKLAELG FKRSADKCKE KFEEESRNFN SISYNKNYRI FSEHDDEFYP DDQDQEPHIS  180
AEKNQQNQEE EEDIGERNIV EGESERTVAA SQENEGQVAM KPRENKKRKR REDKFEMFKG  240
FCEAIVNKIM VQQEELHNKL LEDMLMRDEQ KIAREEAWRN RHMEMIKKEI EIRAEENATA  300
RERQATIIKF LKKFTSDSCE EDQEFVTKIQ DLLKLNMTLP CTIHFHDQTT TTQEKVEAAT  360
SSSMDFIHQK PSSKPCSSSV QLQNPNPAKP NENNQLELTP SSRKRNSKNL HCESGDSGNR  420
WARDEVLALI NLRCKLNNND EIKDGEKGPL WERISQGMLE LGYGRNAKRC KEKWENTNKY  480
FRKTKDSSKK RSLDSRTCPY FQQLSGLYSQ GKLVVPNNEP ENQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1226231KKRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.11e-69Trihelix family protein