PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038479.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 156aa MW: 17056.7 Da PI: 9.2057

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038479.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00081	30	52	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ +L H +H Oeu038479.1 30 FECKTCNRQFPSFQELGGHRASH 52 89***********9999999888 PP
2	zf-C2H2	12	0.00064	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg+ F L H+r+H Oeu038479.1 70 HECPVCGMEFAIGQALGGHMRKH 92 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MKSMANCLML LSNGGGAFDS AVDGSAARVF ECKTCNRQFP SFQELGGHRA SHKKPRFMGE 60 QHSPEKPKTH ECPVCGMEFA IGQALGGHMR KHRTAAVNEN HQQPTAQPAL SLAPPYPHPI 120 VKRSNGRRVF CLDLNLTPLE NKFLLFGKMV PTIDC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	5e-41	C2H2 family protein