PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038498.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 201aa    MW: 22108 Da    PI: 4.8156
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038498.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260133.77.4e-42501491100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++lpe +r+da++s+vy A+ar rdPvyG++g i +lq+q+++l+aela+ +
  Oeu038498.1  50 PCAACKILRRRCVDKCVLAPYFPPSEPLKFTIAHRVFGASNIIKLLQELPEAQRSDAVDSMVYDANARFRDPVYGCAGAICQLQKQISELQAELAKSQ 147
                  7**********************************************************************************************999 PP

       DUF260  99 ee 100
                  +e
  Oeu038498.1 148 AE 149
                  87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MECRENPSIT TTGATAAAVA VATSPSSFSP ISSPTGSFSS FPPRPVSFSP CAACKILRRR  60
CVDKCVLAPY FPPSEPLKFT IAHRVFGASN IIKLLQELPE AQRSDAVDSM VYDANARFRD  120
PVYGCAGAIC QLQKQISELQ AELAKSQAEI LNIQYQNANL VESIYQKMLQ NQENSPQYQQ  180
DEDSRFFLDE SFLGLEPLWT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-67LBD family protein