PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038536.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 267aa    MW: 30044.2 Da    PI: 9.95
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038536.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.3e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+t Ed ll ++++++G g+W++ +++ g+ R++k+c++rw +yl
      Oeu038536.1 14 RGPWSTKEDALLTNYIQEHGDGQWRSLPKKAGLLRCGKSCRLRWMNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding513.4e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++E++l+ +++ +lG++ W++Ia +++ gRt++++k++w+++l
      Oeu038536.1  67 RGNITPDEEDLITRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112
                      7999******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MGRSPCCSKV GLRRGPWSTK EDALLTNYIQ EHGDGQWRSL PKKAGLLRCG KSCRLRWMNY  60
LKPGIKRGNI TPDEEDLITR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLLKKLRTAG  120
IEPKERKDLP KLKSTVPEAK GKQKRKQNKK INEENTNHSK APPRTAVYLP KPIRVSSAFS  180
RSNSVDSLFS GASSSESDVR KNATLAGTAS YVDWALFALE DANYGIHGES QELEFFGGFD  240
MSLPHSECST HLNMLEQVYD EYLQLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-67MYB family protein